Thursday, May 29, 2014

I am revisiting my babbler project.

Looking at the Tracer files again, I see that the "babblers_8_newdate" task provided the best convergence. I installed SumTrees to find the consensus tree.

#install Setuptools
wget -O - | sudo python
#enter password

#install SumTrees

sudo easy_install -U dendropy

Okay realized I have already made the consensus tree back in October!

See directory /Users/loloyohe/Documents/Timaliidae/Babblers Adaptive Radiation/trees/output_trees

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